pystack3d

• pystack3d package
  • Submodules
    • pystack3d.bkg_removal module
    • pystack3d.cropping module
      • cropping()
      • inds_from_area()
    • pystack3d.destriping module
      • destriping()
      • destriping_from_wavelets()
    • pystack3d.intensity_rescaling module
      • init_args()
      • intensity_rescaling()
      • eval()
      • cdf_calculation()
      • plot()
    • pystack3d.intensity_rescaling_area module
      • init_args()
      • intensity_rescaling_area()
      • plot()
    • pystack3d.registration_calculation module
      • init_args()
      • registration_calculation()
      • tmat_calculation()
      • plot()
      • registration_plot()
      • decomposition()
    • pystack3d.registration_transformation module
      • init_args()
      • registration_transformation()
      • plot()
      • img_transformation()
      • constant_drift_removal()
      • running_avg_removal()
      • inner_rectangle()
      • find_max_inner_rectangle()
    • pystack3d.resampling module
      • init_args()
      • resampling()
      • plot()
      • extract_z_from_filenames()
    • pystack3d.stack3d module
      • Stack3d
      • plot()
      • plot_stats_xy()
      • pbar_update()
    • pystack3d.utils module
      • reformat_params()
      • dumps_params()
      • mask_creation()
      • outputs_saving()
      • get_tags()
      • save_tif()
      • img_reformatting()
      • imread_3d_skipping()
      • skipping()
      • division()
      • cumdot()
    • pystack3d.utils_metadata_fibics module
      • params_from_metadata()
      • currents_from_metadata()
      • read_tags()
      • param_from_xml_ETroot()
    • pystack3d.utils_multiprocessing module
      • shared_array_init()
      • worker_init()
      • np_from_array()
      • step_wrapper()
      • initialize_args()
      • collect_shared_array_parts()
      • get_complete_shared_array()
  • Module contents